Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.33■□□□□ 0.04
NR1H2P55055 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.33■□□□□ 0.04
NR1H2P55055 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.33■□□□□ 0.04
NR1H2P55055 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 NKAPP1-205ENST00000585790 367 ntBASIC15.33■□□□□ 0.04
NR1H2P55055 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 AC025062.2-201ENST00000605477 670 ntBASIC15.33■□□□□ 0.04
NR1H2P55055 AC008735.5-201ENST00000623544 497 ntBASIC15.33■□□□□ 0.04
NR1H2P55055 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 AC069224.1-201ENST00000566372 1715 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NR1H2P55055 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.32■□□□□ 0.04
NR1H2P55055 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.32■□□□□ 0.04
NR1H2P55055 AC145285.3-201ENST00000564603 959 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.32■□□□□ 0.04
NR1H2P55055 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
NR1H2P55055 AL022326.1-202ENST00000641533 845 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 AC107918.4-202ENST00000641623 219 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 AL139011.1-202ENST00000642063 584 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 AC232323.1-201ENST00000540724 2099 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 REXO1L5P-201ENST00000622260 2098 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 MIR600HG-201ENST00000449175 5984 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H2P55055 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NR1H2P55055 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H2P55055 AC079776.2-201ENST00000641154 1609 ntBASIC15.32■□□□□ 0.04
NR1H2P55055 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 AL591424.1-201ENST00000442569 1213 ntBASIC15.31■□□□□ 0.04
NR1H2P55055 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.31■□□□□ 0.04
NR1H2P55055 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms