Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 SPDYE17-201ENST00000412399 783 ntBASIC17.03■□□□□ 0.32
CACNA2D1P54289 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.03■□□□□ 0.32
CACNA2D1P54289 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 MIR3197-201ENST00000582241 73 ntBASIC17.03■□□□□ 0.32
CACNA2D1P54289 RN7SL204P-201ENST00000582831 262 ntBASIC17.03■□□□□ 0.32
CACNA2D1P54289 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 AC007950.2-201ENST00000615045 2347 ntBASIC17.03■□□□□ 0.32
CACNA2D1P54289 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CACNA2D1P54289 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D1P54289 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC087499.5-201ENST00000452760 1342 ntBASIC17.02■□□□□ 0.32
CACNA2D1P54289 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC236430.1-201ENST00000402231 743 ntBASIC17.02■□□□□ 0.32
CACNA2D1P54289 TSPY16P-201ENST00000449843 468 ntBASIC17.02■□□□□ 0.32
CACNA2D1P54289 AL512638.1-201ENST00000457493 794 ntBASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 AC008738.7-201ENST00000609744 511 ntBASIC17.02■□□□□ 0.32
CACNA2D1P54289 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D1P54289 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D1P54289 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA2D1P54289 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA2D1P54289 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA2D1P54289 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CACNA2D1P54289 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.02■□□□□ 0.31
CACNA2D1P54289 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms