Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF140P52738 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF140P52738 AC125807.1-201ENST00000483097 614 ntBASIC15.93■□□□□ 0.14
ZNF140P52738 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.93■□□□□ 0.14
ZNF140P52738 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF140P52738 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.93■□□□□ 0.14
ZNF140P52738 AC097359.3-201ENST00000603982 1210 ntBASIC15.93■□□□□ 0.14
ZNF140P52738 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ZNF140P52738 SPDYE12P-201ENST00000618416 771 ntBASIC15.93■□□□□ 0.14
ZNF140P52738 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF140P52738 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.93■□□□□ 0.14
ZNF140P52738 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 CETN4P-206ENST00000642099 2168 ntBASIC15.93■□□□□ 0.14
ZNF140P52738 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.93■□□□□ 0.14
ZNF140P52738 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ZNF140P52738 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF140P52738 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ZNF140P52738 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
ZNF140P52738 KRT18P28-201ENST00000453838 1332 ntBASIC15.93■□□□□ 0.14
ZNF140P52738 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
ZNF140P52738 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 AC046158.3-201ENST00000624947 2558 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 CICP13-201ENST00000422015 2789 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
ZNF140P52738 FO393414.2-201ENST00000405153 598 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 METTL21AP1-201ENST00000438852 635 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
ZNF140P52738 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 KLF2P3-201ENST00000451977 1087 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF140P52738 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.92■□□□□ 0.14
ZNF140P52738 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.92■□□□□ 0.14
ZNF140P52738 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.92■□□□□ 0.14
ZNF140P52738 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
ZNF140P52738 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ZNF140P52738 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ZNF140P52738 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.92■□□□□ 0.14
ZNF140P52738 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ZNF140P52738 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF140P52738 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF140P52738 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ZNF140P52738 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ZNF140P52738 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.91■□□□□ 0.14
ZNF140P52738 RPL37AP1-201ENST00000412502 279 ntBASIC15.91■□□□□ 0.14
ZNF140P52738 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ZNF140P52738 AC136604.1-201ENST00000418535 575 ntBASIC15.91■□□□□ 0.14
ZNF140P52738 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF140P52738 HLA-V-204ENST00000476601 1289 ntBASIC15.91■□□□□ 0.14
ZNF140P52738 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF140P52738 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF140P52738 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF140P52738 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF140P52738 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF140P52738 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms