Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.08■□□□□ 0.49
USP11P51784 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.08■□□□□ 0.48
USP11P51784 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
USP11P51784 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.08■□□□□ 0.48
USP11P51784 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.08■□□□□ 0.48
USP11P51784 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
USP11P51784 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
USP11P51784 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.08■□□□□ 0.48
USP11P51784 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.08■□□□□ 0.48
USP11P51784 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.08■□□□□ 0.48
USP11P51784 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.08■□□□□ 0.48
USP11P51784 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP11P51784 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
USP11P51784 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
USP11P51784 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 AC018892.3-201ENST00000623986 2499 ntBASIC18.07■□□□□ 0.48
USP11P51784 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 AL365203.3-201ENST00000609742 2057 ntBASIC18.07■□□□□ 0.48
USP11P51784 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.07■□□□□ 0.48
USP11P51784 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.07■□□□□ 0.48
USP11P51784 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 AC114501.2-201ENST00000439631 535 ntBASIC18.07■□□□□ 0.48
USP11P51784 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
USP11P51784 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.07■□□□□ 0.48
USP11P51784 UGT1A2P-201ENST00000454886 866 ntBASIC18.07■□□□□ 0.48
USP11P51784 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 HNRNPUP1-201ENST00000554987 333 ntBASIC18.07■□□□□ 0.48
USP11P51784 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.07■□□□□ 0.48
USP11P51784 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 AC008738.7-201ENST00000609744 511 ntBASIC18.07■□□□□ 0.48
USP11P51784 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.07■□□□□ 0.48
USP11P51784 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
USP11P51784 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP11P51784 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP11P51784 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP11P51784 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 TARDBPP1-201ENST00000442013 1203 ntBASIC18.06■□□□□ 0.48
USP11P51784 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms