Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 AL589702.1-201ENST00000641229 1509 ntBASIC17.41■□□□□ 0.38
PDE6CP51160 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PDE6CP51160 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6CP51160 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PDE6CP51160 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6CP51160 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6CP51160 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PDE6CP51160 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6CP51160 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 SPDYE7P-202ENST00000420373 878 ntBASIC17.4■□□□□ 0.38
PDE6CP51160 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.4■□□□□ 0.38
PDE6CP51160 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6CP51160 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6CP51160 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PDE6CP51160 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6CP51160 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDE6CP51160 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PDE6CP51160 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.39■□□□□ 0.37
PDE6CP51160 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.39■□□□□ 0.37
PDE6CP51160 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.39■□□□□ 0.37
PDE6CP51160 AC245100.5-201ENST00000452108 331 ntBASIC17.39■□□□□ 0.37
PDE6CP51160 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.39■□□□□ 0.37
PDE6CP51160 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 LINC01225-203ENST00000563550 1244 ntBASIC17.39■□□□□ 0.37
PDE6CP51160 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6CP51160 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6CP51160 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6CP51160 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 AC112504.1-201ENST00000623415 1841 ntBASIC17.38■□□□□ 0.37
PDE6CP51160 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PDE6CP51160 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 HAUS4P1-201ENST00000406739 1145 ntBASIC17.38■□□□□ 0.37
PDE6CP51160 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 RBPMS2P1-201ENST00000437762 623 ntBASIC17.38■□□□□ 0.37
PDE6CP51160 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms