Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ASCL1P50553 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ASCL1P50553 AL662844.4-201ENST00000606367 2838 ntBASIC14.33□□□□□ -0.11
ASCL1P50553 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
ASCL1P50553 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.33□□□□□ -0.11
ASCL1P50553 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ASCL1P50553 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.33□□□□□ -0.11
ASCL1P50553 AL603756.1-201ENST00000606511 2163 ntBASIC14.33□□□□□ -0.11
ASCL1P50553 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ASCL1P50553 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ASCL1P50553 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.33□□□□□ -0.12
ASCL1P50553 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.33□□□□□ -0.12
ASCL1P50553 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 TP53TG3HP-202ENST00000569755 579 ntBASIC14.33□□□□□ -0.12
ASCL1P50553 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.33□□□□□ -0.12
ASCL1P50553 AC004840.1-201ENST00000636359 365 ntBASIC14.33□□□□□ -0.12
ASCL1P50553 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ASCL1P50553 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 AC092171.3-201ENST00000610122 2651 ntBASIC14.33□□□□□ -0.12
ASCL1P50553 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 FLJ16779-201ENST00000612722 7638 ntBASIC14.33□□□□□ -0.12
ASCL1P50553 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ASCL1P50553 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ASCL1P50553 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 GPAA1P2-202ENST00000606848 1787 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.32□□□□□ -0.12
ASCL1P50553 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 AL589702.1-201ENST00000641229 1509 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 AC087499.6-201ENST00000411576 835 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 DFFBP1-201ENST00000433250 979 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.32□□□□□ -0.12
ASCL1P50553 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.32□□□□□ -0.12
ASCL1P50553 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.32□□□□□ -0.12
ASCL1P50553 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.32□□□□□ -0.12
ASCL1P50553 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ASCL1P50553 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 AL391825.1-201ENST00000457671 1364 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 AL512652.2-201ENST00000625156 1716 ntBASIC14.32□□□□□ -0.12
ASCL1P50553 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
ASCL1P50553 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ASCL1P50553 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.32□□□□□ -0.12
ASCL1P50553 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ASCL1P50553 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ASCL1P50553 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ASCL1P50553 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ASCL1P50553 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ASCL1P50553 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.31□□□□□ -0.12
ASCL1P50553 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ASCL1P50553 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms