Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 SPDYE17-201ENST00000412399 783 ntBASIC18.12■□□□□ 0.49
PRPHP41219 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.12■□□□□ 0.49
PRPHP41219 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 AL133215.2-201ENST00000609242 977 ntBASIC18.12■□□□□ 0.49
PRPHP41219 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
PRPHP41219 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRPHP41219 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PRPHP41219 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.12■□□□□ 0.49
PRPHP41219 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRPHP41219 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.11■□□□□ 0.49
PRPHP41219 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PRPHP41219 AC003101.2-201ENST00000612557 442 ntBASIC18.11■□□□□ 0.49
PRPHP41219 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 AL691403.2-201ENST00000618460 490 ntBASIC18.11■□□□□ 0.49
PRPHP41219 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.11■□□□□ 0.49
PRPHP41219 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.11■□□□□ 0.49
PRPHP41219 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRPHP41219 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.11■□□□□ 0.49
PRPHP41219 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRPHP41219 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.1■□□□□ 0.49
PRPHP41219 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRPHP41219 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.1■□□□□ 0.49
PRPHP41219 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PRPHP41219 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PRPHP41219 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.1■□□□□ 0.49
PRPHP41219 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.1■□□□□ 0.49
PRPHP41219 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRPHP41219 AC069262.1-201ENST00000539058 672 ntBASIC18.1■□□□□ 0.49
PRPHP41219 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.1■□□□□ 0.49
PRPHP41219 MIR4453-201ENST00000584019 89 ntBASIC18.1■□□□□ 0.49
PRPHP41219 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRPHP41219 RN7SL828P-201ENST00000607615 303 ntBASIC18.1■□□□□ 0.49
PRPHP41219 MIR6080-201ENST00000617359 66 ntBASIC18.1■□□□□ 0.49
PRPHP41219 LINC00628-201ENST00000628516 1289 ntBASIC18.1■□□□□ 0.49
PRPHP41219 CICP6-201ENST00000457191 2729 ntBASIC18.1■□□□□ 0.49
PRPHP41219 AC105917.1-201ENST00000506637 2539 ntBASIC18.1■□□□□ 0.49
PRPHP41219 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms