Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 AL133215.2-201ENST00000609242 977 ntBASIC16.52■□□□□ 0.24
ERCC2P18074 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.52■□□□□ 0.24
ERCC2P18074 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
ERCC2P18074 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.52■□□□□ 0.23
ERCC2P18074 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC2P18074 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 REXO1L1P-202ENST00000608646 1974 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 AC018892.3-201ENST00000623986 2499 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ERCC2P18074 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.51■□□□□ 0.23
ERCC2P18074 MTND6P24-201ENST00000440466 518 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC2P18074 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC2P18074 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 Z92544.3-201ENST00000624747 417 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC2P18074 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
ERCC2P18074 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 KRT8P37-201ENST00000451609 1420 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC2P18074 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC2P18074 AL035456.1-201ENST00000456064 1369 ntBASIC16.51■□□□□ 0.23
ERCC2P18074 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC2P18074 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ERCC2P18074 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.5■□□□□ 0.23
ERCC2P18074 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.5■□□□□ 0.23
ERCC2P18074 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 AC025678.2-201ENST00000562061 970 ntBASIC16.5■□□□□ 0.23
ERCC2P18074 GPALPP1-207ENST00000611650 899 ntBASIC16.5■□□□□ 0.23
ERCC2P18074 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC2P18074 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms