Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17■□□□□ 0.31
CCDC130P13994 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17■□□□□ 0.31
CCDC130P13994 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17■□□□□ 0.31
CCDC130P13994 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17■□□□□ 0.31
CCDC130P13994 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17■□□□□ 0.31
CCDC130P13994 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17■□□□□ 0.31
CCDC130P13994 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17■□□□□ 0.31
CCDC130P13994 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17■□□□□ 0.31
CCDC130P13994 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC130P13994 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC130P13994 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC130P13994 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 AC069224.1-201ENST00000566372 1715 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 KRT8P37-201ENST00000451609 1420 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 AC010491.1-201ENST00000563101 2797 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC130P13994 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC130P13994 HIST3H2BA-201ENST00000436555 524 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC130P13994 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC130P13994 RNA5SP421-201ENST00000516864 134 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 AC010336.2-201ENST00000564226 506 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC130P13994 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC130P13994 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC130P13994 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC130P13994 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC130P13994 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC130P13994 AL603832.2-201ENST00000566195 2125 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC130P13994 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 CDC14C-201ENST00000428251 1719 ntBASIC16.99■□□□□ 0.31
CCDC130P13994 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC130P13994 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC130P13994 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 AC087499.5-201ENST00000452760 1342 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC130P13994 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 AZGP1P1-201ENST00000411909 902 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 MRPS18AP1-201ENST00000414458 589 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 RN7SL618P-201ENST00000477850 296 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 LINC02447-202ENST00000501888 2146 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CCDC130P13994 AL096865.1-201ENST00000606796 927 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
CCDC130P13994 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC130P13994 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 AL033527.5-202ENST00000641632 1098 ntBASIC16.98■□□□□ 0.31
CCDC130P13994 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC130P13994 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms