Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PCNAP12004 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCNAP12004 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.72■□□□□ 0.11
PCNAP12004 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.72■□□□□ 0.11
PCNAP12004 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCNAP12004 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCNAP12004 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.72■□□□□ 0.11
PCNAP12004 RARRES2P8-201ENST00000566335 367 ntBASIC15.72■□□□□ 0.11
PCNAP12004 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.72■□□□□ 0.11
PCNAP12004 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.72■□□□□ 0.11
PCNAP12004 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PCNAP12004 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 AC126177.1-201ENST00000547829 2218 ntBASIC15.72■□□□□ 0.11
PCNAP12004 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCNAP12004 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCNAP12004 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.72■□□□□ 0.11
PCNAP12004 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
PCNAP12004 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PCNAP12004 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCNAP12004 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 PMS2P7-201ENST00000506558 1336 ntBASIC15.71■□□□□ 0.11
PCNAP12004 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.71■□□□□ 0.11
PCNAP12004 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.71■□□□□ 0.11
PCNAP12004 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.71■□□□□ 0.11
PCNAP12004 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCNAP12004 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.71■□□□□ 0.11
PCNAP12004 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.71■□□□□ 0.11
PCNAP12004 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCNAP12004 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCNAP12004 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.71■□□□□ 0.1
PCNAP12004 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.1
PCNAP12004 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCNAP12004 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
PCNAP12004 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.71■□□□□ 0.1
PCNAP12004 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.7■□□□□ 0.1
PCNAP12004 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 AL671277.1-201ENST00000429656 993 ntBASIC15.7■□□□□ 0.1
PCNAP12004 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms