Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP1P11387 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TOP1P11387 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP1P11387 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TOP1P11387 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 AC006449.6-201ENST00000612330 2296 ntBASIC18.86■□□□□ 0.61
TOP1P11387 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 AL691432.1-201ENST00000596308 1422 ntBASIC18.86■□□□□ 0.61
TOP1P11387 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TOP1P11387 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 MRPS18AP1-201ENST00000414458 589 ntBASIC18.86■□□□□ 0.61
TOP1P11387 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TOP1P11387 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.86■□□□□ 0.61
TOP1P11387 TSPY16P-201ENST00000449843 468 ntBASIC18.86■□□□□ 0.61
TOP1P11387 AC009477.1-201ENST00000452936 217 ntBASIC18.86■□□□□ 0.61
TOP1P11387 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.86■□□□□ 0.61
TOP1P11387 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP1P11387 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP1P11387 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP1P11387 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 AC022144.1-201ENST00000602255 1580 ntBASIC18.85■□□□□ 0.61
TOP1P11387 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.85■□□□□ 0.61
TOP1P11387 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
TOP1P11387 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.85■□□□□ 0.61
TOP1P11387 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.85■□□□□ 0.61
TOP1P11387 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 AC007950.2-201ENST00000615045 2347 ntBASIC18.85■□□□□ 0.61
TOP1P11387 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.85■□□□□ 0.61
TOP1P11387 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TOP1P11387 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP1P11387 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms