Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLTAP09496 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLTAP09496 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.61■□□□□ 0.41
CLTAP09496 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLTAP09496 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 AC026691.1-201ENST00000602502 2017 ntBASIC17.6■□□□□ 0.41
CLTAP09496 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLTAP09496 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.6■□□□□ 0.41
CLTAP09496 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.6■□□□□ 0.41
CLTAP09496 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.6■□□□□ 0.41
CLTAP09496 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLTAP09496 AC092580.3-201ENST00000430932 139 ntBASIC17.6■□□□□ 0.41
CLTAP09496 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.6■□□□□ 0.41
CLTAP09496 AL139010.1-201ENST00000454878 894 ntBASIC17.6■□□□□ 0.41
CLTAP09496 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.6■□□□□ 0.41
CLTAP09496 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.6■□□□□ 0.41
CLTAP09496 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLTAP09496 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
CLTAP09496 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLTAP09496 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLTAP09496 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.6■□□□□ 0.41
CLTAP09496 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLTAP09496 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 CETN4P-206ENST00000642099 2168 ntBASIC17.59■□□□□ 0.41
CLTAP09496 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
CLTAP09496 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.59■□□□□ 0.41
CLTAP09496 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.59■□□□□ 0.41
CLTAP09496 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.59■□□□□ 0.41
CLTAP09496 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.59■□□□□ 0.41
CLTAP09496 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.59■□□□□ 0.41
CLTAP09496 IGHV3-42-201ENST00000520410 361 ntBASIC17.59■□□□□ 0.41
CLTAP09496 AC027369.6-201ENST00000525520 931 ntBASIC17.59■□□□□ 0.41
CLTAP09496 AL589739.1-201ENST00000607720 493 ntBASIC17.59■□□□□ 0.41
CLTAP09496 AL138828.2-201ENST00000615812 383 ntBASIC17.59■□□□□ 0.41
CLTAP09496 SPDYE12P-201ENST00000618416 771 ntBASIC17.59■□□□□ 0.41
CLTAP09496 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLTAP09496 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.59■□□□□ 0.41
CLTAP09496 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.59■□□□□ 0.41
CLTAP09496 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.58■□□□□ 0.41
CLTAP09496 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.58■□□□□ 0.41
CLTAP09496 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLTAP09496 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.58■□□□□ 0.41
CLTAP09496 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.58■□□□□ 0.41
CLTAP09496 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CLTAP09496 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CLTAP09496 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms