Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
APOC1P02654 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 AC092474.2-201ENST00000424288 719 ntBASIC14.3□□□□□ -0.12
APOC1P02654 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 AC140658.5-201ENST00000438532 169 ntBASIC14.3□□□□□ -0.12
APOC1P02654 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
APOC1P02654 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.3□□□□□ -0.12
APOC1P02654 AC145285.3-201ENST00000564603 959 ntBASIC14.3□□□□□ -0.12
APOC1P02654 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.3□□□□□ -0.12
APOC1P02654 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
APOC1P02654 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
APOC1P02654 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
APOC1P02654 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.29□□□□□ -0.12
APOC1P02654 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC1P02654 AL078644.1-201ENST00000609881 752 ntBASIC14.29□□□□□ -0.12
APOC1P02654 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.29□□□□□ -0.12
APOC1P02654 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 HLA-A-201ENST00000376802 1334 ntBASIC14.29□□□□□ -0.12
APOC1P02654 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOC1P02654 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 AC092919.2-201ENST00000623631 1645 ntBASIC14.29□□□□□ -0.12
APOC1P02654 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC1P02654 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC1P02654 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC1P02654 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms