Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBC1P01850 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 FO393414.2-201ENST00000405153 598 ntBASIC16.07■□□□□ 0.16
TRBC1P01850 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBC1P01850 AC241585.1-201ENST00000433527 519 ntBASIC16.07■□□□□ 0.16
TRBC1P01850 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBC1P01850 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBC1P01850 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBC1P01850 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBC1P01850 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBC1P01850 AL390754.1-201ENST00000619088 582 ntBASIC16.07■□□□□ 0.16
TRBC1P01850 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBC1P01850 AL590560.3-201ENST00000623350 461 ntBASIC16.07■□□□□ 0.16
TRBC1P01850 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBC1P01850 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
TRBC1P01850 AC010491.1-201ENST00000563101 2797 ntBASIC16.07■□□□□ 0.16
TRBC1P01850 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBC1P01850 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBC1P01850 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 REXO1L1P-202ENST00000608646 1974 ntBASIC16.06■□□□□ 0.16
TRBC1P01850 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 HIST3H2BA-201ENST00000436555 524 ntBASIC16.06■□□□□ 0.16
TRBC1P01850 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBC1P01850 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBC1P01850 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBC1P01850 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBC1P01850 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBC1P01850 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRBC1P01850 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRBC1P01850 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 AC087499.5-201ENST00000452760 1342 ntBASIC16.05■□□□□ 0.16
TRBC1P01850 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBC1P01850 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBC1P01850 MIR770-201ENST00000390219 98 ntBASIC16.05■□□□□ 0.16
TRBC1P01850 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBC1P01850 TSSK5P-201ENST00000423978 907 ntBASIC16.05■□□□□ 0.16
TRBC1P01850 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms