Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CD4P01730 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 AC004987.2-201ENST00000395959 1148 ntBASIC17.63■□□□□ 0.41
CD4P01730 BRWD1P1-201ENST00000401091 371 ntBASIC17.63■□□□□ 0.41
CD4P01730 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.63■□□□□ 0.41
CD4P01730 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 FAM86LP-201ENST00000478302 853 ntBASIC17.63■□□□□ 0.41
CD4P01730 AC108725.1-201ENST00000495472 409 ntBASIC17.63■□□□□ 0.41
CD4P01730 AP001889.1-201ENST00000525414 633 ntBASIC17.63■□□□□ 0.41
CD4P01730 AP000812.2-201ENST00000538934 718 ntBASIC17.63■□□□□ 0.41
CD4P01730 ENPP7P5-201ENST00000541031 1031 ntBASIC17.63■□□□□ 0.41
CD4P01730 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.63■□□□□ 0.41
CD4P01730 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.63■□□□□ 0.41
CD4P01730 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CD4P01730 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CD4P01730 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CD4P01730 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
CD4P01730 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CD4P01730 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.62■□□□□ 0.41
CD4P01730 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.62■□□□□ 0.41
CD4P01730 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.62■□□□□ 0.41
CD4P01730 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.62■□□□□ 0.41
CD4P01730 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 AC244093.1-201ENST00000610837 814 ntBASIC17.62■□□□□ 0.41
CD4P01730 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.62■□□□□ 0.41
CD4P01730 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CD4P01730 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.62■□□□□ 0.41
CD4P01730 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.62■□□□□ 0.41
CD4P01730 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD4P01730 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CD4P01730 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
CD4P01730 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
CD4P01730 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.61■□□□□ 0.41
CD4P01730 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD4P01730 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CD4P01730 FAM21FP-201ENST00000426241 1131 ntBASIC17.61■□□□□ 0.41
CD4P01730 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CD4P01730 AC068587.3-201ENST00000526613 355 ntBASIC17.61■□□□□ 0.41
CD4P01730 PTP4A1P2-201ENST00000546033 454 ntBASIC17.61■□□□□ 0.41
CD4P01730 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.61■□□□□ 0.41
CD4P01730 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 AC124283.3-201ENST00000570869 594 ntBASIC17.61■□□□□ 0.41
CD4P01730 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CD4P01730 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.61■□□□□ 0.41
CD4P01730 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.61■□□□□ 0.41
CD4P01730 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.61■□□□□ 0.41
CD4P01730 FLJ38576-201ENST00000623820 2459 ntBASIC17.61■□□□□ 0.41
CD4P01730 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD4P01730 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms