Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ALDH1A1P00352 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 CYP46A4P-201ENST00000414953 267 ntBASIC18.08■□□□□ 0.48
ALDH1A1P00352 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AL450472.2-201ENST00000603663 1156 ntBASIC18.08■□□□□ 0.48
ALDH1A1P00352 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AC134043.2-201ENST00000624206 2238 ntBASIC18.08■□□□□ 0.48
ALDH1A1P00352 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
ALDH1A1P00352 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALDH1A1P00352 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 AC079178.1-201ENST00000420915 656 ntBASIC18.07■□□□□ 0.48
ALDH1A1P00352 AC016700.1-201ENST00000429424 312 ntBASIC18.07■□□□□ 0.48
ALDH1A1P00352 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 AL590640.2-201ENST00000457038 527 ntBASIC18.07■□□□□ 0.48
ALDH1A1P00352 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ALDH1A1P00352 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALDH1A1P00352 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 AL603756.1-201ENST00000606511 2163 ntBASIC18.06■□□□□ 0.48
ALDH1A1P00352 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 RPL17P11-201ENST00000417593 544 ntBASIC18.06■□□□□ 0.48
ALDH1A1P00352 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 CNN2P10-201ENST00000443067 918 ntBASIC18.06■□□□□ 0.48
ALDH1A1P00352 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 AL354989.2-201ENST00000435838 1540 ntBASIC18.06■□□□□ 0.48
ALDH1A1P00352 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
ALDH1A1P00352 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALDH1A1P00352 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms