Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.26■□□□□ 0.03
CLPTM1O96005 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 AL121772.3-201ENST00000610840 674 ntBASIC15.26■□□□□ 0.03
CLPTM1O96005 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.26■□□□□ 0.03
CLPTM1O96005 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLPTM1O96005 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.26■□□□□ 0.03
CLPTM1O96005 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLPTM1O96005 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLPTM1O96005 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLPTM1O96005 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLPTM1O96005 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 AC010460.3-201ENST00000511359 1579 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 TSPY19P-201ENST00000418461 509 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 POM121L3P-201ENST00000419331 1163 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 TSPY18P-201ENST00000441642 509 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 UNC93B7-201ENST00000509439 705 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 AC009533.2-201ENST00000543664 586 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 AC091304.2-201ENST00000564639 760 ntBASIC15.25■□□□□ 0.03
CLPTM1O96005 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLPTM1O96005 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.25■□□□□ 0.03
CLPTM1O96005 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.25■□□□□ 0.03
CLPTM1O96005 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLPTM1O96005 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLPTM1O96005 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.24■□□□□ 0.03
CLPTM1O96005 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms