Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1BO75841 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1BO75841 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1BO75841 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.02□□□□□ -0.16
UPK1BO75841 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1BO75841 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.02□□□□□ -0.16
UPK1BO75841 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.02□□□□□ -0.17
UPK1BO75841 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.02□□□□□ -0.17
UPK1BO75841 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.02□□□□□ -0.17
UPK1BO75841 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 AC142086.2-201ENST00000569753 217 ntBASIC14.02□□□□□ -0.17
UPK1BO75841 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK1BO75841 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
UPK1BO75841 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK1BO75841 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 PPT1-213ENST00000641319 2388 ntBASIC14.02□□□□□ -0.17
UPK1BO75841 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UPK1BO75841 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1BO75841 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
UPK1BO75841 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
UPK1BO75841 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1BO75841 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1BO75841 AL353732.1-201ENST00000569618 1459 ntBASIC14.01□□□□□ -0.17
UPK1BO75841 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UPK1BO75841 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1BO75841 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1BO75841 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 GPR32P1-201ENST00000601788 811 ntBASIC14.01□□□□□ -0.17
UPK1BO75841 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms