Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC093724.1-201ENST00000448659 1027 ntBASIC15.94■□□□□ 0.14
PCDHGA12O60330 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 SRD5A3P1-201ENST00000603021 949 ntBASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC007431.3-201ENST00000623221 587 ntBASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AL139011.1-202ENST00000642063 584 ntBASIC15.94■□□□□ 0.14
PCDHGA12O60330 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA12O60330 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA12O60330 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 WASH4P-201ENST00000564273 1246 ntBASIC15.93■□□□□ 0.14
PCDHGA12O60330 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.93■□□□□ 0.14
PCDHGA12O60330 MIR6799-201ENST00000620297 69 ntBASIC15.93■□□□□ 0.14
PCDHGA12O60330 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA12O60330 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA12O60330 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 CYP2T1P-202ENST00000641596 2535 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 AC132872.4-202ENST00000622924 2756 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA12O60330 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 RPS2P32-201ENST00000439199 892 ntBASIC15.92■□□□□ 0.14
PCDHGA12O60330 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA12O60330 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms