Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 RPS2P1-201ENST00000434010 821 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 OR7E14P-202ENST00000530490 1290 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.34■□□□□ 0.21
RIPK2O43353 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPK2O43353 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPK2O43353 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPK2O43353 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.34■□□□□ 0.21
RIPK2O43353 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 LINC00552-201ENST00000625151 2579 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RIPK2O43353 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RIPK2O43353 AC007191.1-201ENST00000623179 2995 ntBASIC16.34■□□□□ 0.21
RIPK2O43353 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RIPK2O43353 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.33■□□□□ 0.21
RIPK2O43353 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RIPK2O43353 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPK2O43353 AL390755.1-201ENST00000623716 2027 ntBASIC16.33■□□□□ 0.21
RIPK2O43353 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RIPK2O43353 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.33■□□□□ 0.2
RIPK2O43353 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RIPK2O43353 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.33■□□□□ 0.2
RIPK2O43353 AL031432.2-201ENST00000566714 459 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 AL928711.1-201ENST00000570165 459 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPK2O43353 AC004790.2-201ENST00000623588 572 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 AL645728.2-201ENST00000641974 660 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 WASH6P-202ENST00000359512 1437 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 AC126365.1-201ENST00000578585 1514 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 AL589702.1-201ENST00000641229 1509 ntBASIC16.33■□□□□ 0.2
RIPK2O43353 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPK2O43353 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RIPK2O43353 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPK2O43353 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPK2O43353 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPK2O43353 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RIPK2O43353 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 TSPY19P-201ENST00000418461 509 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 GPX1P2-201ENST00000429271 606 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 663.1 ms