Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.66■□□□□ 0.26
MSI1O43347 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 SERBP1P3-201ENST00000459980 809 ntBASIC16.66■□□□□ 0.26
MSI1O43347 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.66■□□□□ 0.26
MSI1O43347 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 AC044860.1-202ENST00000559481 777 ntBASIC16.66■□□□□ 0.26
MSI1O43347 AC092364.2-202ENST00000597012 1073 ntBASIC16.66■□□□□ 0.26
MSI1O43347 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.66■□□□□ 0.26
MSI1O43347 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MSI1O43347 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MSI1O43347 AC024909.3-201ENST00000611513 2257 ntBASIC16.66■□□□□ 0.26
MSI1O43347 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 AC018892.3-201ENST00000623986 2499 ntBASIC16.65■□□□□ 0.26
MSI1O43347 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MSI1O43347 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 AC236430.1-201ENST00000402231 743 ntBASIC16.65■□□□□ 0.26
MSI1O43347 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.65■□□□□ 0.26
MSI1O43347 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.65■□□□□ 0.26
MSI1O43347 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.65■□□□□ 0.26
MSI1O43347 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MSI1O43347 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 DOC2GP-204ENST00000639052 2548 ntBASIC16.65■□□□□ 0.26
MSI1O43347 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 AC010491.1-201ENST00000563101 2797 ntBASIC16.65■□□□□ 0.26
MSI1O43347 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MSI1O43347 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSI1O43347 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.65■□□□□ 0.26
MSI1O43347 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MSI1O43347 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MSI1O43347 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
MSI1O43347 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
MSI1O43347 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.64■□□□□ 0.26
MSI1O43347 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
MSI1O43347 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
MSI1O43347 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 EEF1DP4-201ENST00000446006 880 ntBASIC16.64■□□□□ 0.25
MSI1O43347 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 RN7SL204P-201ENST00000582831 262 ntBASIC16.64■□□□□ 0.25
MSI1O43347 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.64■□□□□ 0.25
MSI1O43347 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 AC004840.1-201ENST00000636359 365 ntBASIC16.64■□□□□ 0.25
MSI1O43347 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSI1O43347 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.64■□□□□ 0.25
MSI1O43347 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MSI1O43347 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms