Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PHGDHO43175 IL9RP2-201ENST00000423948 1312 ntBASIC16.03■□□□□ 0.16
PHGDHO43175 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.03■□□□□ 0.16
PHGDHO43175 AC074386.1-202ENST00000463561 864 ntBASIC16.03■□□□□ 0.16
PHGDHO43175 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PHGDHO43175 PDPK2P-202ENST00000562415 1191 ntBASIC16.03■□□□□ 0.16
PHGDHO43175 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.03■□□□□ 0.16
PHGDHO43175 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PHGDHO43175 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHGDHO43175 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.02■□□□□ 0.16
PHGDHO43175 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PHGDHO43175 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PHGDHO43175 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PHGDHO43175 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.02■□□□□ 0.16
PHGDHO43175 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.02■□□□□ 0.16
PHGDHO43175 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PHGDHO43175 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.02■□□□□ 0.16
PHGDHO43175 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.02■□□□□ 0.16
PHGDHO43175 AL138918.1-201ENST00000568306 659 ntBASIC16.02■□□□□ 0.16
PHGDHO43175 AP002472.1-201ENST00000577490 586 ntBASIC16.02■□□□□ 0.16
PHGDHO43175 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.02■□□□□ 0.16
PHGDHO43175 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.02■□□□□ 0.16
PHGDHO43175 AL161645.1-201ENST00000622716 1255 ntBASIC16.02■□□□□ 0.16
PHGDHO43175 AC092865.6-201ENST00000642101 219 ntBASIC16.02■□□□□ 0.16
PHGDHO43175 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.02■□□□□ 0.16
PHGDHO43175 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.02■□□□□ 0.15
PHGDHO43175 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.02■□□□□ 0.15
PHGDHO43175 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.02■□□□□ 0.15
PHGDHO43175 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.02■□□□□ 0.15
PHGDHO43175 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PHGDHO43175 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.02■□□□□ 0.15
PHGDHO43175 AC011477.6-201ENST00000604980 1927 ntBASIC16.02■□□□□ 0.15
PHGDHO43175 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PHGDHO43175 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
PHGDHO43175 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.01■□□□□ 0.15
PHGDHO43175 GPX1P2-201ENST00000429271 606 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms