Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.13■□□□□ 0.01
SPTBN2O15020 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 AL023775.1-201ENST00000454907 1746 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 AL133466.1-201ENST00000447582 150 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.13■□□□□ 0.01
SPTBN2O15020 CEP164P1-201ENST00000455142 418 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 AC024681.1-201ENST00000521917 487 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 AC023310.1-201ENST00000554836 735 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 AC091544.8-201ENST00000619490 361 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.13■□□□□ 0.01
SPTBN2O15020 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SPTBN2O15020 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SPTBN2O15020 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SPTBN2O15020 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPTBN2O15020 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.12■□□□□ 0.01
SPTBN2O15020 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 AC097065.1-201ENST00000425737 517 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPTBN2O15020 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 DGAT2L7P-201ENST00000602462 744 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 AC145423.3-201ENST00000615987 467 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SPTBN2O15020 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SPTBN2O15020 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.12■□□□□ 0.01
SPTBN2O15020 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.12■□□□□ 0.01
SPTBN2O15020 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 FGFR3P1-201ENST00000449999 601 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 AC133963.1-201ENST00000504166 1679 ntBASIC15.12■□□□□ 0.01
SPTBN2O15020 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPTBN2O15020 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 AC007274.2-201ENST00000421675 662 ntBASIC15.11■□□□□ 0.01
SPTBN2O15020 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.11■□□□□ 0.01
SPTBN2O15020 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SPTBN2O15020 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SPTBN2O15020 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 PCDHB17P-201ENST00000539533 2393 ntBASIC15.11■□□□□ 0.01
SPTBN2O15020 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPTBN2O15020 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms