Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2A1O14983 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 AC112492.5-201ENST00000421897 457 ntBASIC18.3■□□□□ 0.52
ATP2A1O14983 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A1O14983 KRT17P8-201ENST00000540749 863 ntBASIC18.3■□□□□ 0.52
ATP2A1O14983 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A1O14983 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.3■□□□□ 0.52
ATP2A1O14983 AL033527.5-201ENST00000641382 801 ntBASIC18.3■□□□□ 0.52
ATP2A1O14983 CLK3P2-201ENST00000427566 1453 ntBASIC18.3■□□□□ 0.52
ATP2A1O14983 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2A1O14983 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A1O14983 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A1O14983 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A1O14983 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ATP2A1O14983 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A1O14983 AL442647.2-201ENST00000429864 857 ntBASIC18.29■□□□□ 0.52
ATP2A1O14983 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A1O14983 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP2A1O14983 AC036164.1-201ENST00000570544 333 ntBASIC18.29■□□□□ 0.52
ATP2A1O14983 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A1O14983 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATP2A1O14983 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A1O14983 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
ATP2A1O14983 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP2A1O14983 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 HAUS4P1-201ENST00000406739 1145 ntBASIC18.28■□□□□ 0.52
ATP2A1O14983 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A1O14983 AC136604.1-201ENST00000418535 575 ntBASIC18.28■□□□□ 0.52
ATP2A1O14983 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A1O14983 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms