Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AL109954.1-202ENST00000564051 2148 ntBASIC15.19■□□□□ 0.02
CLIC1O00299 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLIC1O00299 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CLIC1O00299 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CLIC1O00299 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLIC1O00299 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLIC1O00299 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 AC025580.3-201ENST00000617932 1424 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.18■□□□□ 0.02
CLIC1O00299 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.18■□□□□ 0.02
CLIC1O00299 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.18■□□□□ 0.02
CLIC1O00299 AC079776.4-201ENST00000511039 504 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 PRYP6-201ENST00000514804 343 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 RNA5SP419-201ENST00000515908 135 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.18■□□□□ 0.02
CLIC1O00299 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLIC1O00299 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 AP001005.1-201ENST00000571755 1248 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 AC105250.1-201ENST00000509378 2057 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 MST1L-201ENST00000442552 2185 ntBASIC15.18■□□□□ 0.02
CLIC1O00299 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CLIC1O00299 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLIC1O00299 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLIC1O00299 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 WASH6P-202ENST00000359512 1437 ntBASIC15.17■□□□□ 0.02
CLIC1O00299 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.17■□□□□ 0.02
CLIC1O00299 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CLIC1O00299 MRPL3P1-201ENST00000400109 1033 ntBASIC15.17■□□□□ 0.02
CLIC1O00299 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.17■□□□□ 0.02
CLIC1O00299 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.17■□□□□ 0.02
CLIC1O00299 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.17■□□□□ 0.02
CLIC1O00299 AC004877.2-201ENST00000623941 599 ntBASIC15.17■□□□□ 0.02
CLIC1O00299 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.17■□□□□ 0.02
CLIC1O00299 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.17■□□□□ 0.02
CLIC1O00299 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.17■□□□□ 0.02
CLIC1O00299 BCAR1-209ENST00000546196 1340 ntBASIC15.17■□□□□ 0.02
CLIC1O00299 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLIC1O00299 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC1O00299 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CLIC1O00299 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.16■□□□□ 0.02
CLIC1O00299 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms