Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AC004877.2-201ENST00000623941 599 ntBASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AL359258.3-201ENST00000622910 2331 ntBASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AC136621.1-201ENST00000624017 2304 ntBASIC16.71■□□□□ 0.27
SRRM3A6NNA2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 CR383656.12-201ENST00000549567 513 ntBASIC16.71■□□□□ 0.27
SRRM3A6NNA2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 AC015911.4-201ENST00000588022 1070 ntBASIC16.71■□□□□ 0.27
SRRM3A6NNA2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM3A6NNA2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SRRM3A6NNA2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
SRRM3A6NNA2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SRRM3A6NNA2 AC007191.1-201ENST00000623179 2995 ntBASIC16.71■□□□□ 0.26
SRRM3A6NNA2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.71■□□□□ 0.26
SRRM3A6NNA2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRRM3A6NNA2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 AC004817.3-201ENST00000602957 2129 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 SNX18-202ENST00000343017 3140 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 AC009336.1-201ENST00000608941 1553 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 AC092919.2-201ENST00000623631 1645 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 BCAR1-209ENST00000546196 1340 ntBASIC16.7■□□□□ 0.26
SRRM3A6NNA2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM3A6NNA2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms