Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 AC134407.2-201ENST00000625089 1978 ntBASIC18.8■□□□□ 0.6
VPS37CA5D8V6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VPS37CA5D8V6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 PMS2P7-201ENST00000506558 1336 ntBASIC18.79■□□□□ 0.6
VPS37CA5D8V6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 AC245100.5-201ENST00000452108 331 ntBASIC18.79■□□□□ 0.6
VPS37CA5D8V6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 AC002347.1-201ENST00000569543 541 ntBASIC18.79■□□□□ 0.6
VPS37CA5D8V6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37CA5D8V6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 AC126755.1-201ENST00000525846 6405 ntBASIC18.78■□□□□ 0.6
VPS37CA5D8V6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 KRT18P2-201ENST00000447938 1258 ntBASIC18.78■□□□□ 0.6
VPS37CA5D8V6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 AC034105.1-201ENST00000563488 319 ntBASIC18.78■□□□□ 0.6
VPS37CA5D8V6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37CA5D8V6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 AC020658.6-201ENST00000623564 1870 ntBASIC18.77■□□□□ 0.6
VPS37CA5D8V6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 WASH6P-202ENST00000359512 1437 ntBASIC18.77■□□□□ 0.6
VPS37CA5D8V6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS37CA5D8V6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms