Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 KRT18P56-201ENST00000507275 550 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 MIR3652-201ENST00000579335 131 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AC008608.2-201ENST00000606089 416 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AL805961.1-202ENST00000641562 540 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC66A2RUB6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 AC006449.6-201ENST00000612330 2296 ntBASIC17.49■□□□□ 0.39
CCDC66A2RUB6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.49■□□□□ 0.39
CCDC66A2RUB6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC66A2RUB6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms