Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC004870.1-201ENST00000315132 882 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC092910.1-201ENST00000482027 1129 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 MIR4751-201ENST00000578027 74 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 RN7SL510P-201ENST00000581311 263 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 ACTL9-202ENST00000612068 1252 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC020765.3-201ENST00000613051 740 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC112504.1-201ENST00000623415 1841 ntBASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF103-CHMP3A0A140T963 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms