Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 AL136982.4-201ENST00000437689 1740 ntBASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.03■□□□□ -0
TRBV5-3A0A0A0MS03 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 AC142381.1-201ENST00000426099 345 ntBASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 AC074386.1-202ENST00000463561 864 ntBASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.02■□□□□ -0
TRBV5-3A0A0A0MS03 CICP23-201ENST00000605013 2741 ntBASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV5-3A0A0A0MS03 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL662844.1-201ENST00000546340 181 ntBASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 RARRES2P8-201ENST00000566335 367 ntBASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-3A0A0A0MS03 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms