Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC010491.1-201ENST00000563101 2797 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV1A0A0A0MS02 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 AL671277.1-201ENST00000429656 993 ntBASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 AL365330.1-201ENST00000607459 531 ntBASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV1A0A0A0MS02 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms