Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX49Q9Y6V7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 AC099063.4-201ENST00000641099 1602 ntBASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX49Q9Y6V7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 KRT8P48-201ENST00000515599 1220 ntBASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 AL139011.1-202ENST00000642063 584 ntBASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX49Q9Y6V7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 AC006277.1-201ENST00000624348 1610 ntBASIC19.37■□□□□ 0.69
DDX49Q9Y6V7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms