Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 MTND6P24-201ENST00000440466 518 ntBASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 RN7SL828P-201ENST00000607615 303 ntBASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 AC241585.1-201ENST00000433527 519 ntBASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 HLA-V-204ENST00000476601 1289 ntBASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 AC100757.3-201ENST00000622361 1406 ntBASIC17.97■□□□□ 0.47
COL4A3BPQ9Y5P4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 LINC02084-201ENST00000606069 1096 ntBASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms