Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FAM197Y3-203ENST00000618346 717 ntBASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF11Q9Y3C5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AC023274.1-201ENST00000418278 595 ntBASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AC112191.1-201ENST00000523689 701 ntBASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF11Q9Y3C5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 PMS2P7-201ENST00000506558 1336 ntBASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 TCAF2P1-201ENST00000291129 2421 ntBASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 HAUS4P1-201ENST00000406739 1145 ntBASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 AL365330.1-201ENST00000607459 531 ntBASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.11
RNF11Q9Y3C5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.71■□□□□ 0.1
RNF11Q9Y3C5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RNF11Q9Y3C5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 SNX18-202ENST00000343017 3140 ntBASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms