Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 HAUS4P1-201ENST00000406739 1145 ntBASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX1-2Q9UD57 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 AC012618.2-201ENST00000428058 849 ntBASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 AC141257.4-201ENST00000634557 245 ntBASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 AC136944.6-201ENST00000634818 245 ntBASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NKX1-2Q9UD57 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX1-2Q9UD57 AL161772.1-201ENST00000610494 4412 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms