Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX4Q9UBX2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AP002414.1-201ENST00000391405 1147 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AC009947.1-201ENST00000444350 727 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AC108751.1-201ENST00000490852 363 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SLC25A6P2-201ENST00000497974 877 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TERC-201ENST00000602385 541 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AC008667.4-201ENST00000607370 168 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AC004790.2-201ENST00000623588 572 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 AC006538.1-201ENST00000567905 1585 ntBASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX4Q9UBX2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 MTHFR-217ENST00000641820 1569 ntBASIC14.23□□□□□ -0.13
DUX4Q9UBX2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PAWRP1-201ENST00000451083 565 ntBASIC14.23□□□□□ -0.13
DUX4Q9UBX2 RPL13AP23-201ENST00000480739 586 ntBASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 IGHV3-65-201ENST00000523210 341 ntBASIC14.23□□□□□ -0.13
DUX4Q9UBX2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX4Q9UBX2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms