Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DNMT3BQ9UBC3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DNMT3BQ9UBC3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
DNMT3BQ9UBC3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
DNMT3BQ9UBC3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DNMT3BQ9UBC3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 ANKRD19P-201ENST00000338192 862 ntBASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 KRT223P-202ENST00000449164 1292 ntBASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AC133552.6-201ENST00000613406 534 ntBASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.67■□□□□ 0.26
DNMT3BQ9UBC3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AL442647.2-201ENST00000429864 857 ntBASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 KRT8P22-201ENST00000562317 1415 ntBASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AL033527.4-201ENST00000641026 673 ntBASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DNMT3BQ9UBC3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
DNMT3BQ9UBC3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms