Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CALYQ9NYX4 CICP6-201ENST00000457191 2729 ntBASIC13.33□□□□□ -0.27
CALYQ9NYX4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CALYQ9NYX4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CALYQ9NYX4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CALYQ9NYX4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CALYQ9NYX4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC011477.6-201ENST00000604980 1927 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AL139384.1-201ENST00000612143 3047 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC069335.1-201ENST00000489972 472 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC243562.2-201ENST00000561247 970 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 MIR4469-201ENST00000583919 79 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC022145.2-201ENST00000598203 171 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AP003680.1-201ENST00000598970 3660 ntBASIC13.33□□□□□ -0.28
CALYQ9NYX4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CALYQ9NYX4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CALYQ9NYX4 AC134407.2-201ENST00000625089 1978 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC105917.1-201ENST00000506637 2539 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC005237.2-201ENST00000434368 219 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 YBX1P5-201ENST00000509441 847 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC010327.4-202ENST00000591484 748 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC055717.3-201ENST00000622967 595 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 AC105339.1-204ENST00000636249 355 ntBASIC13.32□□□□□ -0.28
CALYQ9NYX4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CALYQ9NYX4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CALYQ9NYX4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms