Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 RPL13AP25-201ENST00000484130 612 ntBASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 BAATP1-201ENST00000412284 1225 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 BCYRN1-201ENST00000418539 200 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 SLED1-202ENST00000512051 380 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AC244093.1-201ENST00000610837 814 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AC244669.2-201ENST00000612320 853 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 AC012313.1-201ENST00000593393 3059 ntBASIC17.49■□□□□ 0.39
TRMT13Q9NUP7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AC099548.2-209ENST00000480264 625 ntBASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AC106760.1-201ENST00000508690 800 ntBASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AC005252.2-201ENST00000624630 1141 ntBASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.48■□□□□ 0.39
TRMT13Q9NUP7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms