Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 SSR4P1-203ENST00000599569 2260 ntBASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 CRYGEP-201ENST00000412192 528 ntBASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 UNC93B7-201ENST00000509439 705 ntBASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 AL078644.1-201ENST00000609881 752 ntBASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.81■□□□□ 0.28
HOMER3Q9NSC5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 PPT1-215ENST00000641471 2368 ntBASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC096734.2-201ENST00000562054 433 ntBASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 MIR4321-201ENST00000592276 80 ntBASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOMER3Q9NSC5 AC023157.3-201ENST00000619086 2088 ntBASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HOMER3Q9NSC5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms