Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 BX537318.2-201ENST00000624893 4162 ntBASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AP002761.4-201ENST00000565433 3361 ntBASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC8.11□□□□□ -1.11
CDC42SE1Q9NRR8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDC42SE1Q9NRR8 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms