Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC023310.3-201ENST00000557027 670 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC100756.1-201ENST00000562736 682 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC138749.3-201ENST00000567691 622 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC116165.1-201ENST00000611806 668 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 MIR6069-201ENST00000620069 79 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AC008894.3-201ENST00000624324 3103 ntBASIC16.64■□□□□ 0.25
HPS4Q9NQG7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HPS4Q9NQG7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AL162727.3-201ENST00000635661 2787 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AC005622.1-201ENST00000636801 1703 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AL512384.1-201ENST00000406683 331 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 TPRX2P-201ENST00000535362 881 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 HILS1-202ENST00000545329 423 ntBASIC16.63■□□□□ 0.25
HPS4Q9NQG7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS4Q9NQG7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AC105020.1-201ENST00000435356 2205 ntBASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 GPR53P-205ENST00000457298 1084 ntBASIC16.62■□□□□ 0.25
HPS4Q9NQG7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms