Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 AC006449.6-201ENST00000612330 2296 ntBASIC19.16■□□□□ 0.66
RTN4Q9NQC3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 LIN28AP1-201ENST00000429574 405 ntBASIC19.16■□□□□ 0.66
RTN4Q9NQC3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 AL109954.1-202ENST00000564051 2148 ntBASIC19.16■□□□□ 0.66
RTN4Q9NQC3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.15■□□□□ 0.66
RTN4Q9NQC3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 YY1P1-201ENST00000427625 668 ntBASIC19.15■□□□□ 0.66
RTN4Q9NQC3 YBX1P2-201ENST00000489612 999 ntBASIC19.15■□□□□ 0.66
RTN4Q9NQC3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 AC139887.4-201ENST00000607877 719 ntBASIC19.15■□□□□ 0.66
RTN4Q9NQC3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4Q9NQC3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 CDH11-212ENST00000566827 2395 ntTSL 2 BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
RTN4Q9NQC3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 HBZP1-201ENST00000354915 429 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 ATP5G1P1-201ENST00000448724 379 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AC005332.3-201ENST00000589904 676 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AC107308.1-201ENST00000615897 301 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AC009118.3-201ENST00000622896 873 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 AL118506.1-201ENST00000601296 3082 ntBASIC19.14■□□□□ 0.65
RTN4Q9NQC3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4Q9NQC3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms