Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 LINC00554-201ENST00000564841 3011 ntBASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.61■□□□□ 0.57
BRMS1Q9HCU9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AC008677.1-201ENST00000519230 1561 ntBASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AL627223.1-201ENST00000416693 442 ntBASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRMS1Q9HCU9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.59■□□□□ 0.57
BRMS1Q9HCU9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms