Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AC092850.2-201ENST00000623821 2697 ntBASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 GPX1P2-201ENST00000429271 606 ntBASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 PPT1-215ENST00000641471 2368 ntBASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AC011270.2-201ENST00000624293 2550 ntBASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AC020658.6-201ENST00000623564 1870 ntBASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AC134407.2-201ENST00000625089 1978 ntBASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CICP13-201ENST00000422015 2789 ntBASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AC112191.1-201ENST00000523689 701 ntBASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 AL513190.1-201ENST00000621254 727 ntBASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.49■□□□□ 0.07
LRTM1Q9HBL6 SSR4P1-203ENST00000599569 2260 ntBASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms