Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE11-202ENST00000450699 704 ntBASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 MTRF1LP2-201ENST00000506027 1122 ntBASIC15□□□□□ -0.01
TM9SF2Q99805 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF2Q99805 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF2Q99805 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE9P-201ENST00000570642 692 ntBASIC15□□□□□ -0.01
TM9SF2Q99805 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 CD7-202ENST00000578509 925 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF2Q99805 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF2Q99805 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE10P-202ENST00000612005 668 ntBASIC15□□□□□ -0.01
TM9SF2Q99805 SPDYE8P-202ENST00000612377 668 ntBASIC15□□□□□ -0.01
TM9SF2Q99805 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF2Q99805 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF2Q99805 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF2Q99805 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC004461.1-201ENST00000412461 403 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TIMM8BP1-201ENST00000452384 211 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 HLA-J-202ENST00000469281 1241 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC109635.5-201ENST00000533593 962 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 RARRES2P8-201ENST00000566335 367 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC022145.2-201ENST00000598203 171 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 AL009183.1-201ENST00000603760 355 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.99□□□□□ -0.01
TM9SF2Q99805 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF2Q99805 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF2Q99805 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF2Q99805 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF2Q99805 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms