Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC009090.5-201ENST00000624886 2285 ntBASIC11.78□□□□□ -0.52
MUC4Q99102 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.78□□□□□ -0.52
MUC4Q99102 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MUC4Q99102 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.78□□□□□ -0.52
MUC4Q99102 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.78□□□□□ -0.52
MUC4Q99102 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.78□□□□□ -0.52
MUC4Q99102 WASH6P-202ENST00000359512 1437 ntBASIC11.78□□□□□ -0.52
MUC4Q99102 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
MUC4Q99102 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MUC4Q99102 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MUC4Q99102 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 KRT18P28-201ENST00000453838 1332 ntBASIC11.78□□□□□ -0.52
MUC4Q99102 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MUC4Q99102 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.78□□□□□ -0.52
MUC4Q99102 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.78□□□□□ -0.52
MUC4Q99102 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.78□□□□□ -0.52
MUC4Q99102 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MUC4Q99102 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
MUC4Q99102 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.77□□□□□ -0.52
MUC4Q99102 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MUC4Q99102 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
MUC4Q99102 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.77□□□□□ -0.52
MUC4Q99102 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
MUC4Q99102 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.77□□□□□ -0.53
MUC4Q99102 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.77□□□□□ -0.53
MUC4Q99102 AC096734.2-201ENST00000562054 433 ntBASIC11.77□□□□□ -0.53
MUC4Q99102 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.77□□□□□ -0.53
MUC4Q99102 AL645728.2-201ENST00000641974 660 ntBASIC11.77□□□□□ -0.53
MUC4Q99102 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.77□□□□□ -0.53
MUC4Q99102 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms