Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SNX27Q96L92 FAM86MP-201ENST00000340703 885 ntBASIC17.28■□□□□ 0.36
SNX27Q96L92 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX27Q96L92 AL589987.1-201ENST00000453380 819 ntBASIC17.28■□□□□ 0.36
SNX27Q96L92 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 DOC2GP-202ENST00000514950 1163 ntBASIC17.28■□□□□ 0.36
SNX27Q96L92 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX27Q96L92 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX27Q96L92 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNX27Q96L92 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX27Q96L92 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SNX27Q96L92 REXO1L1P-202ENST00000608646 1974 ntBASIC17.28■□□□□ 0.36
SNX27Q96L92 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX27Q96L92 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 AC006449.5-201ENST00000610658 2098 ntBASIC17.27■□□□□ 0.36
SNX27Q96L92 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX27Q96L92 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX27Q96L92 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX27Q96L92 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SNX27Q96L92 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX27Q96L92 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX27Q96L92 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX27Q96L92 AC092337.1-201ENST00000568699 1129 ntBASIC17.27■□□□□ 0.36
SNX27Q96L92 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX27Q96L92 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX27Q96L92 AC026740.1-201ENST00000607068 791 ntBASIC17.27■□□□□ 0.36
SNX27Q96L92 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX27Q96L92 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX27Q96L92 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX27Q96L92 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX27Q96L92 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX27Q96L92 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX27Q96L92 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SNX27Q96L92 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX27Q96L92 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SNX27Q96L92 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.27■□□□□ 0.35
SNX27Q96L92 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SNX27Q96L92 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 SPDYE19P-201ENST00000338590 713 ntBASIC17.26■□□□□ 0.35
SNX27Q96L92 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX27Q96L92 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX27Q96L92 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX27Q96L92 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX27Q96L92 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX27Q96L92 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms