Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 AP002490.2-201ENST00000524791 560 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 AC025678.2-201ENST00000562061 970 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 U1.21-201ENST00000580816 167 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 AL096865.1-201ENST00000606796 927 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC97Q96F63 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC97Q96F63 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC97Q96F63 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC97Q96F63 AC023824.1-201ENST00000562945 2975 ntBASIC16.53■□□□□ 0.24
CCDC97Q96F63 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC97Q96F63 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC97Q96F63 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 AL118508.1-201ENST00000613502 2345 ntBASIC16.52■□□□□ 0.24
CCDC97Q96F63 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 COX20P2-201ENST00000452636 358 ntBASIC16.52■□□□□ 0.24
CCDC97Q96F63 AC074386.1-202ENST00000463561 864 ntBASIC16.52■□□□□ 0.24
CCDC97Q96F63 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 AL031432.2-201ENST00000566714 459 ntBASIC16.52■□□□□ 0.24
CCDC97Q96F63 AL928711.1-201ENST00000570165 459 ntBASIC16.52■□□□□ 0.24
CCDC97Q96F63 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC97Q96F63 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC97Q96F63 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCDC97Q96F63 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC97Q96F63 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC97Q96F63 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC97Q96F63 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC97Q96F63 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC97Q96F63 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC97Q96F63 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC97Q96F63 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC97Q96F63 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 AL035633.1-201ENST00000406139 838 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 AC092474.2-201ENST00000424288 719 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 FAM58CP-201ENST00000435741 640 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 AL031055.1-201ENST00000606362 631 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 AL645728.2-201ENST00000641974 660 ntBASIC16.51■□□□□ 0.23
CCDC97Q96F63 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC97Q96F63 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC97Q96F63 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms