Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 LDHBP1-201ENST00000455730 1119 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SPCS2P2-201ENST00000603270 608 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AC107373.2-201ENST00000607735 490 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AC128714.1-201ENST00000637035 887 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 AC253536.4-201ENST00000440539 267 ntBASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 RPS2P36-201ENST00000456516 831 ntBASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 IMP3P2-201ENST00000489760 475 ntBASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 AC097724.1-201ENST00000609581 426 ntBASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM43Q96BQ3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 KRT18P43-201ENST00000469825 1281 ntBASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 RNA5SP486-201ENST00000515961 83 ntBASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 HNRNPUP1-201ENST00000554987 333 ntBASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 AP005019.2-201ENST00000615104 511 ntBASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM43Q96BQ3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM43Q96BQ3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM43Q96BQ3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms